Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm25745-201ENSMUST00000174945 133 ntBASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Gm15372-201ENSMUST00000120729 834 ntBASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Ank2-226ENSMUST00000189368 339 ntBASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-3J3QMG8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Gm21362-201ENSMUST00000194272 928 ntBASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Gm9172-201ENSMUST00000212092 954 ntBASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-3J3QMG8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms