Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Mir3081-201ENSMUST00000175305 84 ntBASIC16.22■□□□□ 0.19
Atf6F6VAN0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.22■□□□□ 0.19
Atf6F6VAN0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.21■□□□□ 0.19
Atf6F6VAN0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.21■□□□□ 0.19
Atf6F6VAN0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.21■□□□□ 0.19
Atf6F6VAN0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf6F6VAN0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atf6F6VAN0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Gm6257-201ENSMUST00000163864 910 ntBASIC16.2■□□□□ 0.18
Atf6F6VAN0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf6F6VAN0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Atf6F6VAN0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Rprl3-201ENSMUST00000157400 290 ntBASIC16.19■□□□□ 0.18
Atf6F6VAN0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.19■□□□□ 0.18
Atf6F6VAN0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.19■□□□□ 0.18
Atf6F6VAN0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf6F6VAN0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Gm14859-201ENSMUST00000117752 357 ntBASIC16.18■□□□□ 0.18
Atf6F6VAN0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.18■□□□□ 0.18
Atf6F6VAN0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms