Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Chd2E9PZM4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Chd2E9PZM4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Chd2E9PZM4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.51■■□□□ 1.03
Chd2E9PZM4 AC132467.2-202ENSMUST00000227726 559 ntBASIC21.51■■□□□ 1.03
Chd2E9PZM4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Syt7-205ENSMUST00000224135 1557 ntBASIC21.51■■□□□ 1.03
Chd2E9PZM4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Syt7-204ENSMUST00000223586 1344 ntBASIC21.51■■□□□ 1.03
Chd2E9PZM4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd2E9PZM4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm18049-201ENSMUST00000208909 581 ntBASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.5■■□□□ 1.03
Chd2E9PZM4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm38225-201ENSMUST00000194001 393 ntBASIC21.5■■□□□ 1.03
Chd2E9PZM4 Gm44344-201ENSMUST00000200287 129 ntBASIC21.5■■□□□ 1.03
Chd2E9PZM4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd2E9PZM4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Gm13337-201ENSMUST00000119183 1594 ntBASIC21.49■■□□□ 1.03
Chd2E9PZM4 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.49■■□□□ 1.03
Chd2E9PZM4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd2E9PZM4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Gm18766-201ENSMUST00000189811 808 ntBASIC21.48■■□□□ 1.03
Chd2E9PZM4 Gm8597-201ENSMUST00000191525 1109 ntBASIC21.48■■□□□ 1.03
Chd2E9PZM4 Gm43433-201ENSMUST00000196573 481 ntBASIC21.48■■□□□ 1.03
Chd2E9PZM4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC21.48■■□□□ 1.03
Chd2E9PZM4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.48■■□□□ 1.03
Chd2E9PZM4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd2E9PZM4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd2E9PZM4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Gm15222-202ENSMUST00000228667 1726 ntBASIC21.46■■□□□ 1.03
Chd2E9PZM4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd2E9PZM4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms