Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm11127A7VMS2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm11127A7VMS2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Gm30025-201ENSMUST00000218555 728 ntBASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm11127A7VMS2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14□□□□□ -0.17
Gm11127A7VMS2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gm11127A7VMS2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm11127A7VMS2 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm11127A7VMS2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms