Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm18025-201ENSMUST00000221733 862 ntBASIC14.43□□□□□ -0.1
CtcflA2APF3 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.43□□□□□ -0.1
CtcflA2APF3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.43□□□□□ -0.1
CtcflA2APF3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
CtcflA2APF3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.43□□□□□ -0.1
CtcflA2APF3 Rubie-203ENSMUST00000227803 2430 ntBASIC14.43□□□□□ -0.1
CtcflA2APF3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.43□□□□□ -0.1
CtcflA2APF3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtcflA2APF3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CtcflA2APF3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CtcflA2APF3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.42□□□□□ -0.1
CtcflA2APF3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.42□□□□□ -0.1
CtcflA2APF3 Gm10698-201ENSMUST00000182663 604 ntBASIC14.42□□□□□ -0.1
CtcflA2APF3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CtcflA2APF3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CtcflA2APF3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtcflA2APF3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CtcflA2APF3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.41□□□□□ -0.1
CtcflA2APF3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CtcflA2APF3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.41□□□□□ -0.1
CtcflA2APF3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.41□□□□□ -0.1
CtcflA2APF3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtcflA2APF3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.41□□□□□ -0.1
CtcflA2APF3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.4□□□□□ -0.1
CtcflA2APF3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CtcflA2APF3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.4□□□□□ -0.1
CtcflA2APF3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.4□□□□□ -0.1
CtcflA2APF3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtcflA2APF3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CtcflA2APF3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtcflA2APF3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtcflA2APF3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms