Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 AC102291.3-201ENSMUST00000226566 405 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Mir6404-201ENSMUST00000183699 94 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Gm44344-201ENSMUST00000200287 129 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 AC140451.2-201ENSMUST00000228030 664 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Wnt10b-206ENSMUST00000228546 2709 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Gm18737-201ENSMUST00000173594 937 ntBASIC8.23□□□□□ -1.09
Ubr4A2AN08 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ubr4A2AN08 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm12008-201ENSMUST00000117791 755 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm37259-201ENSMUST00000193903 849 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm9176-201ENSMUST00000219955 1120 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms