Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-30A0A140T8M3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm27000-201ENSMUST00000182943 842 ntBASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Mtag2-201ENSMUST00000058665 714 ntBASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-30A0A140T8M3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-30A0A140T8M3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-30A0A140T8M3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms