Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm27405-201ENSMUST00000184201 112 ntBASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm44450-201ENSMUST00000199528 114 ntBASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm12896-201ENSMUST00000118430 226 ntBASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms