Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav6d-5A0A075B6B9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav6d-5A0A075B6B9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-5A0A075B6B9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6d-5A0A075B6B9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm27463-201ENSMUST00000183569 57 ntBASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm3375-201ENSMUST00000203929 796 ntBASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6d-5A0A075B6B9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-5A0A075B6B9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm12527-201ENSMUST00000117967 564 ntBASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6d-5A0A075B6B9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms