Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-3A0A075B6B3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-3A0A075B6B3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm6623-201ENSMUST00000173570 544 ntBASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-3A0A075B6B3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6d-3A0A075B6B3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav6d-3A0A075B6B3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6d-3A0A075B6B3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-3A0A075B6B3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-3A0A075B6B3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms