Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm15565-201ENSMUST00000118890 427 ntBASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm13559-201ENSMUST00000120476 863 ntBASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm11539-201ENSMUST00000119837 557 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm13436-201ENSMUST00000120418 567 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm43799-201ENSMUST00000201845 579 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm18959-201ENSMUST00000208954 655 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6n-6A0A075B6B2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Mir7071-201ENSMUST00000184847 69 ntBASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms