Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm12821-201ENSMUST00000120022 600 ntBASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm27454-201ENSMUST00000185090 204 ntBASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Trav12d-3A0A075B6A4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-3A0A075B6A4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms