Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trdv1A0A075B657 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gm8520-201ENSMUST00000186517 868 ntBASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trdv1A0A075B657 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.03□□□□□ -0.48
Trdv1A0A075B657 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms