Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-4A0A075B652 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-4A0A075B652 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Gm10013-201ENSMUST00000106074 672 ntBASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-4A0A075B652 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Gm10052-201ENSMUST00000168019 960 ntBASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Gm7729-201ENSMUST00000050143 801 ntBASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-4A0A075B652 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms