Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Gm7370-201ENSMUST00000219471 767 ntBASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-6A0A075B640 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Gm27011-201ENSMUST00000182352 972 ntBASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-6A0A075B640 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-6A0A075B640 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms