Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm22697-201ENSMUST00000175194 63 ntBASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm37722-201ENSMUST00000193757 208 ntBASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Gm18101-201ENSMUST00000215769 548 ntBASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-4A0A075B631 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm15565-201ENSMUST00000118890 427 ntBASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm21559-201ENSMUST00000220638 855 ntBASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gm8587-201ENSMUST00000076538 843 ntBASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-4A0A075B631 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms