Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Gm7222-201ENSMUST00000117512 906 ntBASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Gm4459-201ENSMUST00000118750 468 ntBASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col13a1Q9R1N9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col13a1Q9R1N9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms