Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cml3Q9JIY8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cml3Q9JIY8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cml3Q9JIY8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms