Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1fQ9JIS7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1fQ9JIS7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Gm2272-201ENSMUST00000194903 582 ntBASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Cacna1fQ9JIS7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1fQ9JIS7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1fQ9JIS7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Gm23547-201ENSMUST00000158210 271 ntBASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
Cacna1fQ9JIS7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Mir7023-201ENSMUST00000185093 64 ntBASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Grk6-207ENSMUST00000225925 2769 ntBASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1fQ9JIS7 Gm2810-201ENSMUST00000118681 990 ntBASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Gm18889-201ENSMUST00000174284 929 ntBASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms