Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco4Q9JIS3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smco4Q9JIS3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smco4Q9JIS3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Gm13534-201ENSMUST00000121169 513 ntBASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Gm14117-201ENSMUST00000122417 843 ntBASIC12.76□□□□□ -0.37
Smco4Q9JIS3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Gm26833-201ENSMUST00000180899 440 ntBASIC12.76□□□□□ -0.37
Smco4Q9JIS3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco4Q9JIS3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Gm13401-201ENSMUST00000117074 291 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Gm43173-201ENSMUST00000202246 593 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Rps24-207ENSMUST00000224568 714 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smco4Q9JIS3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms