Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3bQ9ES34 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Ube3bQ9ES34 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3bQ9ES34 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Gm37444-201ENSMUST00000193605 439 ntBASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Gm37153-201ENSMUST00000193637 231 ntBASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Psmb5-202ENSMUST00000227257 622 ntBASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ube3bQ9ES34 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.75■□□□□ 0.59
Ube3bQ9ES34 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.75■□□□□ 0.59
Ube3bQ9ES34 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gm5364-201ENSMUST00000216789 889 ntBASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3bQ9ES34 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.73■□□□□ 0.59
Ube3bQ9ES34 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms