Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndc80Q9D0F1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc80Q9D0F1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Gm27742-201ENSMUST00000184667 60 ntBASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndc80Q9D0F1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Gm7284-201ENSMUST00000131667 944 ntBASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc80Q9D0F1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ndc80Q9D0F1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Gm27704-201ENSMUST00000185094 107 ntBASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc80Q9D0F1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms