Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.69■□□□□ 0.1
Trim33Q99PP7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim33Q99PP7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.68■□□□□ 0.1
Trim33Q99PP7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.68■□□□□ 0.1
Trim33Q99PP7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim33Q99PP7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim33Q99PP7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms