Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Gm33142-201ENSMUST00000193913 867 ntBASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Gm17808-201ENSMUST00000200859 894 ntBASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1b1Q99LU0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp1b1Q99LU0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp1b1Q99LU0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.96□□□□□ -0.02
Chmp1b1Q99LU0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1b1Q99LU0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms