Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb4Q91XZ6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Mir770-201ENSMUST00000103252 94 ntBASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb4Q91XZ6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms