Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm18195-201ENSMUST00000207604 706 ntBASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhga9Q91XX9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Gm9172-201ENSMUST00000212092 954 ntBASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhga9Q91XX9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms