Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx41Q91VN6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Gm36967-201ENSMUST00000193814 266 ntBASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx41Q91VN6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx41Q91VN6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx41Q91VN6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ddx41Q91VN6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms