Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Gm22240-201ENSMUST00000175225 82 ntBASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SfpqQ8VIJ6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SfpqQ8VIJ6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SfpqQ8VIJ6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SfpqQ8VIJ6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SfpqQ8VIJ6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SfpqQ8VIJ6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
SfpqQ8VIJ6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SfpqQ8VIJ6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SfpqQ8VIJ6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SfpqQ8VIJ6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SfpqQ8VIJ6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.69■□□□□ 0.26
SfpqQ8VIJ6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms