Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Odf4Q8VI88 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.18□□□□□ -0.14
Odf4Q8VI88 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Odf4Q8VI88 Sybu-209ENSMUST00000228639 4113 ntBASIC14.17□□□□□ -0.14
Odf4Q8VI88 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf4Q8VI88 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.16□□□□□ -0.14
Odf4Q8VI88 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Gm27000-201ENSMUST00000182943 842 ntBASIC14.16□□□□□ -0.14
Odf4Q8VI88 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Odf4Q8VI88 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Gm7153-201ENSMUST00000117092 455 ntBASIC14.15□□□□□ -0.14
Odf4Q8VI88 Gm11336-201ENSMUST00000118168 334 ntBASIC14.15□□□□□ -0.14
Odf4Q8VI88 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Odf4Q8VI88 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms