Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rpa1Q8VEE4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rpa1Q8VEE4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 BC037039-201ENSMUST00000192003 2205 ntBASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rpa1Q8VEE4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rpa1Q8VEE4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms