Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpap2Q8VC34 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Prob1-201ENSMUST00000097619 3021 ntBASIC17.33■□□□□ 0.37
Rpap2Q8VC34 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Gm8655-201ENSMUST00000221159 852 ntBASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Gm10819-201ENSMUST00000099988 561 ntBASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpap2Q8VC34 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Birc2-201ENSMUST00000054878 378 ntBASIC17.32■□□□□ 0.36
Rpap2Q8VC34 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpap2Q8VC34 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Gm18622-201ENSMUST00000219361 595 ntBASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 App-207ENSMUST00000227737 2827 ntBASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpap2Q8VC34 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.31■□□□□ 0.36
Rpap2Q8VC34 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms