Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gm7370-201ENSMUST00000219471 767 ntBASIC12.93□□□□□ -0.34
Nup35Q8R4R6 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup35Q8R4R6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup35Q8R4R6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms