Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.31■□□□□ 0.04
Cdt1Q8R4E9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdt1Q8R4E9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdt1Q8R4E9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdt1Q8R4E9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms