Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf39Q8K2Z2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf39Q8K2Z2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Prpf39Q8K2Z2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf39Q8K2Z2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf39Q8K2Z2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf39Q8K2Z2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms