Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cchcr1Q8K2I2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Gm6345-202ENSMUST00000180900 204 ntBASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.72■□□□□ 0.59
Cchcr1Q8K2I2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.71■□□□□ 0.59
Cchcr1Q8K2I2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cchcr1Q8K2I2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cchcr1Q8K2I2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cchcr1Q8K2I2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms