Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm9727-201ENSMUST00000161387 555 ntBASIC17.16■□□□□ 0.34
Trim68Q8K243 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim68Q8K243 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Gm6550-201ENSMUST00000187574 993 ntBASIC17.16■□□□□ 0.34
Trim68Q8K243 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim68Q8K243 AV026068-213ENSMUST00000223675 1171 ntBASIC17.16■□□□□ 0.34
Trim68Q8K243 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim68Q8K243 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trim68Q8K243 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim68Q8K243 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim68Q8K243 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.16■□□□□ 0.34
Trim68Q8K243 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim68Q8K243 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Gm27628-201ENSMUST00000184911 107 ntBASIC17.15■□□□□ 0.34
Trim68Q8K243 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.15■□□□□ 0.34
Trim68Q8K243 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim68Q8K243 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim68Q8K243 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Trim68Q8K243 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim68Q8K243 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim68Q8K243 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.14■□□□□ 0.33
Trim68Q8K243 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim68Q8K243 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.14■□□□□ 0.33
Trim68Q8K243 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim68Q8K243 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.14■□□□□ 0.33
Trim68Q8K243 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim68Q8K243 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim68Q8K243 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.14■□□□□ 0.33
Trim68Q8K243 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim68Q8K243 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim68Q8K243 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim68Q8K243 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim68Q8K243 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms