Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.84■□□□□ 0.45
Syne4Q8CII8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Syne4Q8CII8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syne4Q8CII8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Gm43125-201ENSMUST00000201724 730 ntBASIC17.83■□□□□ 0.44
Syne4Q8CII8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.83■□□□□ 0.44
Syne4Q8CII8 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.83■□□□□ 0.44
Syne4Q8CII8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syne4Q8CII8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.82■□□□□ 0.44
Syne4Q8CII8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syne4Q8CII8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Gm22175-201ENSMUST00000175007 78 ntBASIC17.81■□□□□ 0.44
Syne4Q8CII8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne4Q8CII8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms