Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Gm2213-201ENSMUST00000197485 688 ntBASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Gm45167-201ENSMUST00000208007 322 ntBASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Gm5867-201ENSMUST00000063197 592 ntBASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab11fip3Q8CHD8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.41■□□□□ 0.86
Rab11fip3Q8CHD8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Mir8117-201ENSMUST00000184773 107 ntBASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Gm9682-201ENSMUST00000197505 556 ntBASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab11fip3Q8CHD8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rab11fip3Q8CHD8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rab11fip3Q8CHD8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rab11fip3Q8CHD8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rab11fip3Q8CHD8 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.39■□□□□ 0.86
Rab11fip3Q8CHD8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Gm14494-201ENSMUST00000118786 435 ntBASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.39■□□□□ 0.85
Rab11fip3Q8CHD8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.38■□□□□ 0.85
Rab11fip3Q8CHD8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms