Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm25406-201ENSMUST00000157599 105 ntBASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm18101-201ENSMUST00000215769 548 ntBASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox30Q8CGW4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox30Q8CGW4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox30Q8CGW4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Sox30Q8CGW4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox30Q8CGW4 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms