Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh1Q8CGV4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh1Q8CGV4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.33■□□□□ 0.05
Rdh1Q8CGV4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh1Q8CGV4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh1Q8CGV4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh1Q8CGV4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Gm19164-201ENSMUST00000210667 640 ntBASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh1Q8CGV4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Gm14140-201ENSMUST00000119999 995 ntBASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.32■□□□□ 0.04
Rdh1Q8CGV4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gm15358-201ENSMUST00000119249 520 ntBASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gm11764-201ENSMUST00000120221 623 ntBASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh1Q8CGV4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms