Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab43Q8CG50 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rab43Q8CG50 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Gm10175-201ENSMUST00000086013 645 ntBASIC15.4■□□□□ 0.06
Rab43Q8CG50 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab43Q8CG50 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Haglr-201ENSMUST00000100000 2085 ntBASIC15.39■□□□□ 0.05
Rab43Q8CG50 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gm45167-201ENSMUST00000208007 322 ntBASIC15.39■□□□□ 0.05
Rab43Q8CG50 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.39■□□□□ 0.05
Rab43Q8CG50 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rab43Q8CG50 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Gm15358-201ENSMUST00000119249 520 ntBASIC15.38■□□□□ 0.05
Rab43Q8CG50 Gm7787-201ENSMUST00000216858 688 ntBASIC15.38■□□□□ 0.05
Rab43Q8CG50 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Rab43Q8CG50 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.37■□□□□ 0.05
Rab43Q8CG50 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm25911-201ENSMUST00000157621 56 ntBASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm6257-201ENSMUST00000163864 910 ntBASIC15.37■□□□□ 0.05
Rab43Q8CG50 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab43Q8CG50 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms