Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Gm4995-201ENSMUST00000117247 432 ntBASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Gm2213-201ENSMUST00000197485 688 ntBASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ufl1Q8CCJ3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.92■□□□□ 0.62
Ufl1Q8CCJ3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ufl1Q8CCJ3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ufl1Q8CCJ3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ufl1Q8CCJ3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ufl1Q8CCJ3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ufl1Q8CCJ3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms