Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc46a2Q8CA03 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc46a2Q8CA03 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Gm7977-201ENSMUST00000193787 748 ntBASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc46a2Q8CA03 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc46a2Q8CA03 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc46a2Q8CA03 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc46a2Q8CA03 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.02
Slc46a2Q8CA03 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gm13474-201ENSMUST00000122466 815 ntBASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Gm10566-201ENSMUST00000086739 996 ntBASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc46a2Q8CA03 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms