Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Gm12933-201ENSMUST00000120203 872 ntBASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Gm43183-201ENSMUST00000200632 547 ntBASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smco3Q8BQM7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smco3Q8BQM7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Asic1-205ENSMUST00000228185 1818 ntBASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smco3Q8BQM7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms