Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Grk6-207ENSMUST00000225925 2769 ntBASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col16a1Q8BLX7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Gm10499-201ENSMUST00000174094 934 ntBASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col16a1Q8BLX7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col16a1Q8BLX7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Col16a1Q8BLX7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Gm12151-201ENSMUST00000121374 290 ntBASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Gm5779-201ENSMUST00000218467 910 ntBASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col16a1Q8BLX7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Gm24158-201ENSMUST00000175263 71 ntBASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col16a1Q8BLX7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms