Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn3Q8BHH8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Asic1-205ENSMUST00000228185 1818 ntBASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn3Q8BHH8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn3Q8BHH8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Prob1-201ENSMUST00000097619 3021 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm15794-201ENSMUST00000120182 631 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm27742-201ENSMUST00000184667 60 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm27704-201ENSMUST00000185094 107 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms