Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npas4Q8BGD7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Npas4Q8BGD7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npas4Q8BGD7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npas4Q8BGD7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Npas4Q8BGD7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Gm14057-201ENSMUST00000120631 482 ntBASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Mir6956-201ENSMUST00000183598 62 ntBASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npas4Q8BGD7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms