Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Gm10566-201ENSMUST00000086739 996 ntBASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3bQ80YF6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Upk3bQ80YF6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.4□□□□□ -0.27
Upk3bQ80YF6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bQ80YF6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bQ80YF6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Gm26039-201ENSMUST00000158152 144 ntBASIC13.37□□□□□ -0.27
Upk3bQ80YF6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms