Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Gm25406-201ENSMUST00000157599 105 ntBASIC17.27■□□□□ 0.36
Ush1gQ80T11 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ush1gQ80T11 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ush1gQ80T11 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ush1gQ80T11 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.26■□□□□ 0.35
Ush1gQ80T11 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ush1gQ80T11 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.26■□□□□ 0.35
Ush1gQ80T11 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.25■□□□□ 0.35
Ush1gQ80T11 Gm26308-201ENSMUST00000157768 69 ntBASIC17.25■□□□□ 0.35
Ush1gQ80T11 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ush1gQ80T11 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.24■□□□□ 0.35
Ush1gQ80T11 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ush1gQ80T11 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Mir6404-201ENSMUST00000183699 94 ntBASIC17.23■□□□□ 0.35
Ush1gQ80T11 Mir8117-201ENSMUST00000184773 107 ntBASIC17.23■□□□□ 0.35
Ush1gQ80T11 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms