Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Prpf38bQ80SY5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf38bQ80SY5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Prpf38bQ80SY5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Prpf38bQ80SY5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Prpf38bQ80SY5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38bQ80SY5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Gm13186-201ENSMUST00000118031 316 ntBASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Gm15173-201ENSMUST00000122049 433 ntBASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38bQ80SY5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38bQ80SY5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Gm29707-201ENSMUST00000196325 491 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms